MS-Digest Instructions

A protein digestion tool from the that performs an in silico enzymatic digestion of a protein sequence, and calculates the mass of each peptide. Specify the MS-Digest index number produced by MS-Fit, MS-Tag, MS-Seq or MS-Edman, OR the accession number from the database, OR a user supplied sequence.

	MS-Fit		MS-Seq	MS-Edman
MS-Product	MS-Comp	DB-Stat	MS-Isotope

Digest:	Cysteines modified by:
Max. # of missed cleavages: Hide Protein Sequence: Report Multiple Charges: Hide HTML Links:	N terminus: C terminus: Considered Modifications: User Defined Modification 1:

Digest:

Cysteines modified by:

Max. # of missed cleavages:

Hide Protein Sequence:

Report Multiple Charges:

Hide HTML Links:

N terminus: C terminus:
Considered Modifications:

User Defined Modification 1:

For Digestion of a Sequence in a Database:
Database:	Reading Frame: (for DNA only)
Retrieve Database Entry by:	MS-Digest Index Number:
	DESIGNATE WHICH ONE TO USE
	Database Accession Number:

For Digestion of a User Supplied Sequence:	User Protein MUST be selected as Database, above
Protein Sequence:	User Specified Amino Acid (u):
Paste or type sequence in this field. Delete these instructions first. Tabs, returns, and spaces are ignored. USE CAPITAL LETTERS. The following lower case letters can be used: s,t,y - Phosphorylated S,T,Y u - user specified amino acid (provide elemental composition --->) Do NOT use the letters B, J, O, U, X, or Z. Do NOT use 3-letter code amino acid symbols.	C: H: N: Default is Glycine O: S: P:

Similar Programs:

MS-Digest byPeteAndKarl (); Instructions

MS-Digest Instructions